Geometric analysis characterizes molecular rigidity in generic and non-generic protein configurations

DOI10.1016/j.jmps.2015.06.006zbMath1321.74004OpenAlexW1556977774WikidataQ35871812 ScholiaQ35871812MaRDI QIDQ497387

Henry van den Bedem, Sigrid Leyendecker, Dominik Budday

Publication date: 24 September 2015

Published in: Journal of the Mechanics and Physics of Solids (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc4509548

zbMATH Keywords

rigidityproteinconformational samplingnullspaceprotein collective motionssingular configuration

Mathematics Subject Classification ID

Fluid-solid interactions (including aero- and hydro-elasticity, porosity, etc.) (74F10) Kinematics of deformation (74A05) Kinematics (70B99)

Cites Work

• The generic rank of body-bar-and-hinge frameworks
• Matrix computations.
• Rigidity of multi-graphs. I: Linking rigid bodies in n-space
• An algorithm for two-dimensional rigidity percolation: The pebble game
• Identifying multi-DOF-loss velocity degeneracies in kinematically-redundant manipulators.
• Connected rigidity matroids and unique realizations of graphs
• Kinematical analysis of overconstrained and underconstrained mechanisms by means of computational algebraic geometry
• How does symmetry impact the flexibility of proteins?
• The discrete null space method for the energy consistent integration of constrained mechanical systems. Part II: multibody dynamics
• Eigenvalues and Condition Numbers of Random Matrices
• Conditions for Unique Graph Realizations
• Unnamed Item
• Unnamed Item
• Unnamed Item
• Unnamed Item

This page was built for publication: Geometric analysis characterizes molecular rigidity in generic and non-generic protein configurations