Error Detection and Correction of Gene Trees

DOI10.1007/978-1-4471-5298-9_12zbMath1462.92040OpenAlexW39630659MaRDI QIDQ4992761

Nadia El-Mabrouk, Manuel Lafond, Krister M. Swenson

Publication date: 10 June 2021

Published in: Models and Algorithms for Genome Evolution (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-1-4471-5298-9_12

zbMATH Keywords

random treegene treeensembl treelower common ancestorwinner node

Mathematics Subject Classification ID

Problems related to evolution (92D15) Genetics and epigenetics (92D10)

Related Items (1)

Orthology Relation and Gene Tree Correction: Complexity Results

Uses Software

• PHYLIP
• RAxML
• PAUP*
• Notung
• bioperl
• PAML
• ClustalW
• GIGA
• TreeFix

Cites Work

• Unnamed Item
• Parameterized complexity of \(k\)-anonymity: hardness and tractability
• DLS-trees: a model of evolutionary scenarios
• Minimum Leaf Removal for Reconciliation: Complexity and Algorithms
• On the Similarity of Sets of Permutations and Its Applications to Genome Comparison
• Alignment Uncertainty and Genomic Analysis
• Reconciling Gene Trees with Apparent Polytomies
• Algorithms for Finding Gene Clusters

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