Discussion of “Exponential-Family Embedding With Application to Cell Developmental Trajectories for Single-Cell RNA-Seq Data”

DOI10.1080/01621459.2021.1880919zbMath1464.62440OpenAlexW3170199543WikidataQ115551737 ScholiaQ115551737MaRDI QIDQ4999117

Jian Hu, Mingyao Li

Publication date: 6 July 2021

Published in: Journal of the American Statistical Association (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1080/01621459.2021.1880919

zbMATH Keywords

oligodendrocytesmatrix factorizationgene expressionlatent space modelsrandom dot product model

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Numerical methods for low-rank matrix approximation; matrix compression (65F55)

Uses Software

• PMA
• slingshot

Cites Work

• A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis
• Local Procrustes for manifold embedding: a measure of embedding quality and embedding algorithms
• Gene expression distribution deconvolution in single-cell RNA sequencing

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