SCOTT: Shape-Location Combined Tracking with Optimal Transport

DOI10.1137/19M1253976zbMath1482.92047OpenAlexW3015210747MaRDI QIDQ5027029

James Z. Wang, Jia Li, Jianbo Ye, Xinye Zheng

Publication date: 3 February 2022

Published in: SIAM Journal on Mathematics of Data Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1137/19m1253976

zbMATH Keywords

optimal transportpoint set registrationcell trackingbiological imaging

Mathematics Subject Classification ID

Biomedical imaging and signal processing (92C55)

Uses Software

• ilastik
• EMD
• GitHub
• POT
• MOT16

Cites Work

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• Multi-marginal optimal transport: Theory and applications
• Kantorovich-Rubinstein Norm and Its Application in the Theory of Lipschitz Spaces
• Iterative Bregman Projections for Regularized Transportation Problems
• 3-D Active Meshes: Fast Discrete Deformable Models for Cell Tracking in 3-D Time-Lapse Microscopy
• <formula formulatype="inline"><tex Notation="TeX">$3D+t$</tex></formula> Morphological Processing: Applications to Embryogenesis Image Analysis
• Prescribing a System of Random Variables by Conditional Distributions

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