Rewriting Theory for the Life Sciences: A Unifying Theory of CTMC Semantics
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Publication:5100733
DOI10.1007/978-3-030-51372-6_11zbMath1502.68146OpenAlexW3037418945MaRDI QIDQ5100733
Publication date: 1 September 2022
Published in: Graph Transformation (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/978-3-030-51372-6_11
stochastic mechanicsorganic chemistrybiochemistrydouble-pushout rewritingsesqui-pushout rewritingrule algebra
Biochemistry, molecular biology (92C40) Grammars and rewriting systems (68Q42) Applications of continuous-time Markov processes on discrete state spaces (60J28)
Related Items (5)
Fundamentals of compositional rewriting theory ⋮ Unnamed Item ⋮ Rewriting theory for the life sciences: a unifying theory of CTMC semantics ⋮ A generalized concurrent rule construction for double-pushout rewriting: generalized concurrency theorem and language-preserving rule applications ⋮ Concurrency theorems for non-linear rewriting theories
Uses Software
Cites Work
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- Computational methods in systems biology. International conference CMSB 2004, Paris, France, May 26--28, 2004. Revised selected papers.
- Formal molecular biology
- Rewriting theory for the life sciences: a unifying theory of CTMC semantics
- Fundamentals of algebraic graph transformation
- Moment Semantics for Reversible Rule-Based Systems
- ℳ-Adhesive Transformation Systems with Nested Application Conditions. Part 2: Embedding, Critical Pairs and Local Confluence
- $\mathcal M, \mathcal N$ -Adhesive Transformation Systems
- A Software Package for Chemically Inspired Graph Transformation
- Transformation and Refinement of Rigid Structures
- Rule-Based Modelling of Cellular Signalling
- Sesqui-Pushout Rewriting
- Correctness of high-level transformation systems relative to nested conditions
- Stochastic mechanics of graph rewriting
- Compositionality of Rewriting Rules with Conditions
- Intrinsic information carriers in combinatorial dynamical systems
- Graph Transformations
- Adhesive and quasiadhesive categories
- Finitary -adhesive categories
- -adhesive transformation systems with nested application conditions. Part 1: parallelism, concurrency and amalgamation
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