Efficiently Inferring the Demographic History of Many Populations With Allele Count Data

DOI10.1080/01621459.2019.1635482zbMath1441.62919OpenAlexW2955533153WikidataQ100433993 ScholiaQ100433993MaRDI QIDQ5120682

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Publication date: 15 September 2020

Published in: Journal of the American Statistical Association (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1080/01621459.2019.1635482

zbMATH Keywords

population geneticsfrequency spectrumcoalescent theorydemographic inference

Mathematics Subject Classification ID

Applications of statistics to social sciences (62P25) Population dynamics (general) (92D25)

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Uses Software

• ABCtoolbox
• GATK
• Autograd
• PoMo
• fastsimcoal

Cites Work

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• The joint allele frequency spectrum of multiple populations: a coalescent theory approach
• A countable representation of the Fleming-Viot measure-valued diffusion
• Probability Models for DNA Sequence Evolution
• The age of a mutation in a general coalescent tree
• Inference in Molecular Population Genetics
• Importance sampling on coalescent histories. II: Subdivided population models