Computing the Minimal Rebinding Effect Included in a Given Kinetics

DOI10.1137/13091124XzbMath1317.82030OpenAlexW2022321246MaRDI QIDQ5250334

Konstantin Fackeldey, Marcus Weber

Publication date: 19 May 2015

Published in: Multiscale Modeling & Simulation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1137/13091124x

zbMATH Keywords

cooperativityconformation dynamicsmolecular kineticsrebindingrecrossing

Mathematics Subject Classification ID

Factorization of matrices (15A23) Theory of matrix inversion and generalized inverses (15A09) Determinants, permanents, traces, other special matrix functions (15A15) Dynamic continuum models (systems of particles, etc.) in time-dependent statistical mechanics (82C21)

Related Items (4)

Finding Dominant Structures of Nonreversible Markov Processes ⋮ Overcoming the timescale barrier in molecular dynamics: Transfer operators, variational principles and machine learning ⋮ Mixed-Integer Programming for Cycle Detection in Nonreversible Markov Processes ⋮ Computing the Minimal Rebinding Effect for NonReversible Processes

Cites Work

• Identification of almost invariant aggregates in reversible nearly uncoupled Markov chains
• Robust Perron cluster analysis in conformation dynamics
• On the Approximation Quality of Markov State Models
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