A Compact Mathematical Programming Formulation for DNA Motif Finding

DOI10.1007/11780441_22zbMath1196.92013OpenAlexW1552913826MaRDI QIDQ5307509

Carl Kingsford, Elena Zaslavsky, Mona Singh

Publication date: 14 September 2007

Published in: Combinatorial Pattern Matching (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/11780441_22

Mathematics Subject Classification ID

Applications of mathematical programming (90C90) Integer programming (90C10) Linear programming (90C05) Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

Related Items (3)

Mathematical programming in computational biology: an annotated bibliography ⋮ A cost-aggregating integer linear program for motif finding ⋮ Generation of networks with prescribed degree-dependent clustering

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