Deprecated: $wgMWOAuthSharedUserIDs=false is deprecated, set $wgMWOAuthSharedUserIDs=true, $wgMWOAuthSharedUserSource='local' instead [Called from MediaWiki\HookContainer\HookContainer::run in /var/www/html/w/includes/HookContainer/HookContainer.php at line 135] in /var/www/html/w/includes/Debug/MWDebug.php on line 372
Improved statistical tests for differential gene expression by shrinking variance components estimates - MaRDI portal

Improved statistical tests for differential gene expression by shrinking variance components estimates

From MaRDI portal
Publication:5313574

DOI10.1093/biostatistics/kxh018zbMath1069.62090OpenAlexW2110891968WikidataQ40477238 ScholiaQ40477238MaRDI QIDQ5313574

Gary A. Churchill, Xiangqin Cui, Natalie J. Blades, J. T. Gene Hwang, Jing Qiu

Publication date: 1 September 2005

Published in: Biostatistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1093/biostatistics/kxh018




Related Items (32)

A family of flexible shrinkage estimators for the variances of high-dimensional gene expressionsAsymptotically optimal shrinkage estimates for non-normal dataControl Charts for Mean under Shrinkage TechniqueVariance Estimation in the Analysis of Microarray DataTilting Methods for Assessing the Influence of Components in a ClassifierEmpirical Bayes Confidence Intervals for Selected Parameters in High-Dimensional DataNonparametric estimation of genewise variance for microarray dataAn Enhanced Quantile Approach for Assessing Differential Gene ExpressionsJames-Stein type estimators of variancesRegularized t$$ t $$ distribution: definition, properties, and applicationsLaplace approximated EM microarray analysis: an empirical Bayes approach for comparative microarray experimentsEvaluation of Laplace distribution-based ANOVA models applied to microarray dataEstimating the proportion of true null hypotheses using the pattern of observedp-valuesRobust semiparametric optimal testing procedure for multiple normal meansApplying shrinkage variance estimators to the TOST test in high dimensional settingsEmpirical Bayes Confidence Intervals Shrinking Both Means and VariancesModified test statistics by inter-voxel variance shrinkage with an application to f MRITesting significance of features by lassoed principal componentsAssumption adequacy averaging as a concept for developing more robust methods for differential gene expression analysisA structural mixed model to shrink covariance matrices for time-course differential gene expression studiesA flexible approximate likelihood ratio test for detecting differential expression in microarray dataJoint adaptive mean-variance regularization and variance stabilization of high dimensional dataMaximum Average-Power (MAP) TestsSample size calculation for a regularized \(t\)-statistic in microarray experimentsSharp Simultaneous Confidence Intervals for the Means of Selected Populations with Application to Microarray Data AnalysisThe importance of distinct modeling strategies for gene and gene-specific treatment effects in hierarchical models for microarray dataSHRINKAGE, PRETEST AND ABSOLUTE PENALTY ESTIMATORS IN PARTIALLY LINEAR MODELSLOPSIDED REASONING ON LOPSIDED TESTS AND MULTIPLE COMPARISONSEmpirical and fully Bayesian approaches for random effects models in microarray data analysisFunctional Hierarchical Models for Identifying Genes with Different Time‐Course Expression ProfilesShrinkage‐based Diagonal Discriminant Analysis and Its Applications in High‐Dimensional DataComputational Biology: Toward Deciphering Gene Regulatory Information in Mammalian Genomes


Uses Software



This page was built for publication: Improved statistical tests for differential gene expression by shrinking variance components estimates