Parametric analysis of RNA branching configurations
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Publication:542013
DOI10.1007/s11538-010-9607-3zbMath1214.92020arXiv0904.3700OpenAlexW1976652160WikidataQ46167873 ScholiaQ46167873MaRDI QIDQ542013
Valerie Hower, Christine E. Heitsch
Publication date: 8 June 2011
Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/0904.3700
Combinatorial properties of polytopes and polyhedra (number of faces, shortest paths, etc.) (52B05) Biochemistry, molecular biology (92C40)
Related Items (3)
On the Structure of RNA Branching Polytopes ⋮ Optimality regions and fluctuations for Bernoulli last passage models ⋮ Algebraic methods in mathematical biology
Uses Software
Cites Work
- Large deviations for random trees and the branching of RNA secondary structures
- Large deviations for random trees
- Enumerations of ordered trees
- Linear trees and RNA secondary structure
- Parametric optimization of sequence alignment
- Ordered trees with prescribed root degrees, node degrees, and branch lengths
- An Exploration of Pick's Theorem in Space
- Parametric Sequence Alignment
- Tropical geometry of statistical models
- Parametric inference for biological sequence analysis
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