Application of New Multiresolution Methods for the Comparison of Biomolecular Electrostatic Properties in the Absence of Global Structural Similarity

DOI10.1137/050647670zbMath1125.92006OpenAlexW2086501194WikidataQ33374537 ScholiaQ33374537MaRDI QIDQ5432405

Todd J. Dolinsky, Jens E. Nielsen, Nathan A. Baker, Bongjune Kwon, Chandrajit L. Bajaj, Xiao-Yu Zhang

Publication date: 3 January 2008

Published in: Multiscale Modeling & Simulation (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc2561295

zbMATH Keywords

clusteringsimilarityelectrostaticPoisson-Boltzmanncontour tree

Mathematics Subject Classification ID

PDEs in connection with optics and electromagnetic theory (35Q60) Biochemistry, molecular biology (92C40) Finite difference methods applied to problems in optics and electromagnetic theory (78M20) Biophysics (92C05) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)

Related Items (2)

Flexible isosurfaces: Simplifying and displaying scalar topology using the contour tree ⋮ Topology Based Selection and Curation of Level Sets

Uses Software

• APBS
• PDB2PQR

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