Estimating DNA methylation levels by joint modeling of multiple methylation profiles from microarray data

DOI10.1111/biom.12422zbMath1419.62470OpenAlexW2176256668WikidataQ31001241 ScholiaQ31001241MaRDI QIDQ5739257

Mengjie Chen, Tao Wang, Hongyu Zhao

Publication date: 15 July 2016

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc4820364

zbMATH Keywords

probe effectDNA methylation indexgroup-fused Lassomoded-based analysis

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10)

Uses Software

• Bioconductor
• cghseg
• Minfi
• BSmooth

Cites Work

• Model selection criteria in multivariate models with multiple structural changes
• Estimating the dimension of a model
• Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection
• Detecting simultaneous changepoints in multiple sequences
• A Modified Bayes Information Criterion with Applications to the Analysis of Comparative Genomic Hybridization Data
• Model Selection and Estimation in Regression with Grouped Variables
• Exploration, normalization, and summaries of high density oligonucleotide array probe level data
• Group descent algorithms for nonconvex penalized linear and logistic regression models with grouped predictors
• A new look at the statistical model identification

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