Analyzing and visualizing sequence and distance data using SPLITSTREE

DOI10.1016/S0166-218X(96)00059-5zbMath0879.92020MaRDI QIDQ5961620

Vincent L. Moulton, Andreas W. M. Dress, Daniel H. Huson

Publication date: 18 January 1998

Published in: Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL: http://www.elsevier.com/locate/dam

zbMATH Keywords

phylogenetic analysissplit-decompositionsplits-graphsSplitsTree program

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of graph theory (05C90) Protein sequences, DNA sequences (92D20)

Related Items

On the structure of the tight-span of a totally split-decomposable metric, Antipodal metrics and split systems, Statistics for phylogenetic trees, Unnamed Item, A note on the uniqueness of coherent decompositions, Unnamed Item, Phylogenetics of artificial manuscripts, An explicit computation of the injective hull of certain finite metric spaces in terms of their associated Buneman complex, Six points suffice: How to check for metric consistency, Integer linear programming as a tool for constructing trees from quartet data, The Buneman index via polyhedral split decomposition, Retractions of finite distance functions onto tree metrics, A comparison between two distinct continuous models in projective cluster theory: The median and the tight-span construction, On the number of vertices and edges of the Buneman graph, Some variations on a theme by Buneman, Fullerenes and coordination polyhedra versus half-cube embeddings, The tight span of an antipodal metric space. I: combinatorial properties

Uses Software

• SplitsTree

Cites Work

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• Reconstructing the shape of a tree from observed dissimilarity data
• Trees, tight extensions of metric spaces, and the cohomological dimension of certain groups: A note on combinatorial properties of metric spaces
• Weak hierarchies associated with similarity measures - An additive clustering technique
• A canonical decomposition theory for metrics on a finite set
• Fourier calculus on evolutionary trees
• An order theoretic framework for overlapping clustering
• Spectral analysis of phylogenetic data
• \(T\)-theory: An overview
• Six theorems about injective metric spaces