A coalescent process with simultaneous multiple mergers for approximating the gene genealogies of many marine organisms

DOI10.1016/j.tpb.2008.04.009zbMath1210.92028OpenAlexW2096338369WikidataQ51685824 ScholiaQ51685824MaRDI QIDQ615510

John Wakeley, Ori Sargsyan

Publication date: 5 January 2011

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2008.04.009

zbMATH Keywords

coalescentmarine organismssimultaneous multiple mergers

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Genetics and epigenetics (92D10)

Related Items

The site-frequency spectrum associated with \(\varXi\)-coalescents ⋮ Estimation of parameters in large offspring number models and ratios of coalescence times ⋮ Genealogical properties of subsamples in highly fecund populations ⋮ Multi-locus data distinguishes between population growth and multiple merger coalescents ⋮ Asymptotic behavior of a Moran model with mutations, drift and recombination among multiple loci ⋮ Structured coalescent processes from a modified Moran model with large offspring numbers ⋮ Computational Inference Beyond Kingman's Coalescent ⋮ Linearization of the Kingman coalescent ⋮ The diversity of a distributed genome in bacterial populations ⋮ A coalescent dual process in a Moran model with genic selection, and the lambda coalescent limit ⋮ Rare events in stochastic populations under bursty reproduction ⋮ A coalescent dual process in a Moran model with genic selection, and the lambda coalescent limit ⋮ Evolution of highly fecund haploid populations ⋮ On selection in finite populations ⋮ Phase-type distributions in population genetics ⋮ The coalescence of intrahost HIV lineages under symmetric CTL attack ⋮ An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations ⋮ Multiple merger gene genealogies in two species: monophyly, paraphyly, and polyphyly for two examples of lambda coalescents ⋮ Robust model selection between population growth and multiple merger coalescents

Cites Work

• Unnamed Item
• Approximating selective sweeps
• The coalescent
• Coalescents with multiple collisions
• Coalescents with simultaneous multiple collisions
• Alpha-stable branching and beta-coalescents
• A classification of coalescent processes for haploid exchangeable population models
• Statistical properties of segregating sites
• The sampling theory of selectively neutral alleles
• A coalescent model for the effect of advantageous mutations on the genealogy of a population
• Random partitions approximating the coalescence of lineages during a selective sweep
• The latent roots of certain Markov chains arising in genetics: A new approach, II. Further haploid models
• The age of a mutation in a general coalescent tree
• The latent roots of certain Markov chains arising in genetics: A new approach, I. Haploid models
• Convergence to the coalescent with simultaneous multiple mergers
• The general coalescent with asynchronous mergers of ancestral lines
• The equivalence of some overlapping and non-overlapping generation models for the study of genetic drift