Testing the order of Markov dependence in DNA sequences

DOI10.1007/s11009-008-9107-1zbMath1207.92012OpenAlexW1994707058MaRDI QIDQ631473

María del Carmen Pardo, Leandro Pardo, M. Luisa Menendez, Konstantinos G. Zografos

Publication date: 14 March 2011

Published in: Methodology and Computing in Applied Probability (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11009-008-9107-1

zbMATH Keywords

likelihood ratio testMarkov dependenceDNA sequencephi-divergence test statistics

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Probabilistic models, generic numerical methods in probability and statistics (65C20) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Biochemistry, molecular biology (92C40) Markov processes: hypothesis testing (62M02)

Related Items (2)

Tsallis conditional mutual information in investigating long range correlation in symbol sequences ⋮ Constrained Markov order surrogates

Cites Work

• On tests of independence based on minimum \(\varphi \)-divergence estimator with constraints: An application to modeling DNA
• Goodness-of-fit statistics for discrete multivariate data
• The \(\varphi\)-divergence statistic in bivariate multinomial populations including stratification
• Statistical Methods in Markov Chains
• Fitting Markov Chain Models to Discrete State Series such as DNA Sequences
• A TEST FOR MARKOFF CHAINS
• Csiszar's \(\varphi\)-divergence for testing the order in a Markov chain.
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