Computing algebraic degrees of phylogenetic varieties

DOI10.2140/astat.2023.14.215zbMath1541.624MaRDI QIDQ6578644

Luis David García-Puente, Unnamed Author, Marina Garrote-López

Publication date: 25 July 2024

Published in: Algebraic Statistics (Search for Journal in Brave)

zbMATH Keywords

symbolic computationsnumerical algebraic geometryphylogeneticsmaximum likelihood degreeEuclidean distance degree

Mathematics Subject Classification ID

Problems related to evolution (92D15) Numerical computation of solutions to systems of equations (65H10) Algebraic statistics (62R01) Computational real algebraic geometry (14Q30)

Cites Work

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• Fourier calculus on evolutionary trees
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• Solving the likelihood equations
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• Algebraic Statistics
• Distinguishing Phylogenetic Networks
• Catalog of Small Trees
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• Estimation of evolutionary distances between homologous nucleotide sequences.
• A Polyhedral Method for Solving Sparse Polynomial Systems
• The maximum likelihood degree
• Algebraic Statistics for Computational Biology
• The Euclidean distance degree of an algebraic variety
• Certifying zeros of polynomial systems using interval arithmetic

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