Embedding phylogenetic trees in networks of low treewidth
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Publication:6599789
DOI10.46298/DMTCS.10116zbMATH Open1546.0514MaRDI QIDQ6599789
Mark Jones, Leo van Iersel, Mathias Weller
Publication date: 6 September 2024
Published in: Discrete Mathematics and Theoretical Computer Science. DMTCS (Search for Journal in Brave)
embeddingtreewidthphylogenetic treefixed-parameter tractabilityphylogenetic networktree containmentdisplay graph
Analysis of algorithms and problem complexity (68Q25) Trees (05C05) Small world graphs, complex networks (graph-theoretic aspects) (05C82)
Cites Work
- Title not available (Why is that?)
- Title not available (Why is that?)
- Kernelizations for the hybridization number problem on multiple nonbinary trees
- Folding and unfolding phylogenetic trees and networks
- Compatibility of unrooted phylogenetic trees is FPT
- Computing the minimum number of hybridization events for a consistent evolutionary history
- Are there any good digraph width measures?
- Seeing the trees and their branches in the network is hard
- The directed subgraph homeomorphism problem
- Treewidth. Computations and approximations
- Treewidth distance on phylogenetic trees
- Solving the tree containment problem in linear time for nearly stable phylogenetic networks
- Solving the tree containment problem for reticulation-visible networks in linear time
- Locating a tree in a phylogenetic network
- On unrooted and root-uncertain variants of several well-known phylogenetic network problems
- Measuring what matters: a hybrid approach to dynamic programming with treewidth
- On cherry-picking and network containment
- Deterministic single exponential time algorithms for connectivity problems parameterized by treewidth
- Efficient FPT algorithms for (strict) compatibility of unrooted phylogenetic trees
- A quadratic kernel for computing the hybridization number of multiple trees
- The monadic second-order logic of graphs. I: Recognizable sets of finite graphs
- The rigid hybrid number for two phylogenetic trees
- Phylogenetic incongruence through the lens of monadic second order logic
- Solving the Tree Containment Problem for Genetically Stable Networks in Quadratic Time
- A \(c^k n\) 5-approximation algorithm for treewidth
- On Low Treewidth Graphs and Supertrees
- Scanning Phylogenetic Networks Is NP-hard
- Easy problems for tree-decomposable graphs
- Improved Approximation Algorithms for Minimum Weight Vertex Separators
- Handbook of Graph Grammars and Computing by Graph Transformation
- Drawing Tree-Based Phylogenetic Networks with Minimum Number of Crossings
- Hitting topological minors is FPT
- Treewidth of display graphs: bounds, brambles and applications
- Finding topological subgraphs is fixed-parameter tractable
- Solving Connectivity Problems Parameterized by Treewidth in Single Exponential Time
- Parameterized Algorithms
- A Linear-Time Algorithm for Finding Tree-Decompositions of Small Treewidth
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