Tropical logistic regression model on space of phylogenetic trees

DOI10.1007/S11538-024-01327-8MaRDI QIDQ6617222

Burak Boyacı, James A. Grant, Georgios Aliatimis, Ruriko Yoshida

Publication date: 10 October 2024

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

zbMATH Keywords

coalescent modeltropical geometryultrametricsclassificationsgene trees and species trees

Mathematics Subject Classification ID

Bayesian inference (62F15) Problems related to evolution (92D15) Applications of tropical geometry (14T90)

Cites Work

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• Geometry of the space of phylogenetic trees
• Tropical principal component analysis and its application to phylogenetics
• A note on the metric properties of trees
• The Bergman complex of a matroid and phylogenetic trees
• Information geometry for phylogenetic trees
• Tropical Gaussians: a brief survey
• Tropical Fermat--Weber Points
• Convexity in Tree Spaces
• Tropical medians by transportation
• Tropical Support Vector Machines: Evaluations and Extension to Function Spaces

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