Acceleration of FM-index queries through prefix-free parsing

DOI10.4230/LIPICS.WABI.2023.13MaRDI QIDQ6651039

Dominik Köppl, Aaron Hong, Travis Gagie, Christina Boucher, Marco Oliva, Hideo Bannai

Publication date: 9 December 2024

zbMATH Keywords

scalabilityrandom accessFM-indexpangenomicsword-based indexing

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Genetics and epigenetics (92D10)

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