Sequencing by hybridization with isothermic oligonucleotide libraries

DOI10.1016/j.dam.2003.09.006zbMath1056.92019OpenAlexW1993429924WikidataQ57387802 ScholiaQ57387802MaRDI QIDQ705498

Marta Kasprzak, Jacek Błażewicz, Piotr Formanowicz, Wojciech T. Markiewicz

Publication date: 31 January 2005

Published in: Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.dam.2003.09.006

zbMATH Keywords

DNA sequencingIsothermic oligonucleotide libraries

Mathematics Subject Classification ID

Combinatorics on words (68R15) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Complexity and performance of numerical algorithms (65Y20)

Related Items (7)

Dealing with repetitions in sequencing by hybridization ⋮ Graph algorithms for DNA sequencing -- origins, current models and the future ⋮ Classification of de Bruijn-based labeled digraphs ⋮ Computational complexity of isothermic DNA sequencing by hybridization ⋮ Tabu search algorithm for DNA sequencing by hybridization with isothermic libraries ⋮ Multistage isothermic sequencing by hybridization ⋮ Evolutionary approaches to DNA sequencing with errors

Cites Work

• Unnamed Item
• On finding minimal length superstrings
• Complexity of DNA sequencing by hybridization.
• Tabu search for DNA sequencing with false negatives and false positives
• On some properties of DNA graphs

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