Collective motions in protein structures: applications of elastic network models built from electron density distributions

DOI10.1016/j.cpc.2008.01.013zbMath1197.92017OpenAlexW2017345298WikidataQ62570723 ScholiaQ62570723MaRDI QIDQ711202

Daniel P. Vercauteren, Laurence Leherte

Publication date: 25 October 2010

Published in: Computer Physics Communications (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.cpc.2008.01.013

zbMATH Keywords

critical pointselectron densityprotein dynamicselastic network modelsoverlap integralpancreatic thrypsin inhibitor

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Biophysics (92C05) Physiology (general) (92C30) Systems biology, networks (92C42)

Uses Software

• OpenDX

Cites Work

• Low frequency motion in proteins. Comparison of normal mode and molecular dynamics of Streptomyces Griseus Protease A