Diffusion-controlled reactions modeling in Geant4-DNA

DOI10.1016/J.JCP.2014.06.011zbMath1352.92054OpenAlexW1987824639WikidataQ61509396 ScholiaQ61509396MaRDI QIDQ728637

D. Kharzeev

Publication date: 20 December 2016

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jcp.2014.06.011

zbMATH Keywords

Fokker-Planck equationBrownian bridgeBrownian dynamicsradiation chemistrychemical kinetics simulationdynamical time stepsGeant4-DNAk-d treeradiobiologyradiolysisSmoluchowski diffusion equation

Mathematics Subject Classification ID

Classical flows, reactions, etc. in chemistry (92E20) Biochemistry, molecular biology (92C40)

Uses Software

• GEANT4
• MCELL
• E-CELL
• PARTRAC
• Smoldyn

Cites Work

• Unnamed Item
• The Fokker-Planck equation. Methods of solutions and applications.
• A quasistationary analysis of a stochastic chemical reaction: Keizer's paradox
• Fast Monte Carlo Simulation Methods for Biological Reaction-Diffusion Systems in Solution and on Surfaces
• An Algorithm for Finding Best Matches in Logarithmic Expected Time

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