An RNA secondary structure prediction method based on minimum and suboptimal free energy structures

DOI10.1016/J.JTBI.2015.05.007zbMath1343.92377OpenAlexW800800553WikidataQ40810795 ScholiaQ40810795MaRDI QIDQ739246

Lianping Yang, Haoyue Fu, Xiang-De Zhang

Publication date: 18 August 2016

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2015.05.007

zbMATH Keywords

support vector machinecomparative methodsstem common degree

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Protein sequences, DNA sequences (92D20)

Uses Software

• CompaRNA
• RNAalifold
• TurboFold
• iLoc-Euk
• MARNA
• CentroidAlifold

Cites Work

• A high-accuracy protein structural class prediction algorithm using predicted secondary structural information
• Support-vector networks
• On Finding All Suboptimal Foldings of an RNA Molecule
• Algorithms for Loop Matchings

This page was built for publication: An RNA secondary structure prediction method based on minimum and suboptimal free energy structures