Extended strings and graphs for simple gene assembly

DOI10.1016/j.tcs.2009.10.011zbMath1227.05008OpenAlexW2081103736MaRDI QIDQ846362

Robert Brijder, Miika Langille, Ion Petre

Publication date: 9 February 2010

Published in: Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tcs.2009.10.011

zbMATH Keywords

stringsciliatessimple gene assembly

Mathematics Subject Classification ID

Permutations, words, matrices (05A05) Biochemistry, molecular biology (92C40) Grammars and rewriting systems (68Q42) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10) Genetics and epigenetics (92D10)

Related Items (1)

Simple gene assembly as a rewriting of directed overlap-inclusion graphs

Cites Work

• Computation in living cells. Gene assembly in ciliates
• A String-Based Model for Simple Gene Assembly
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