Estimating change rates of genetic markers using serial samples: applications to the transposon IS6110 in Mycobacterium tuberculosis

DOI10.1016/S0040-5809(03)00010-8zbMath1098.62147OpenAlexW2059084798WikidataQ45991355 ScholiaQ45991355MaRDI QIDQ849454

Anthony G. Tsolaki, Noah A. Rosenberg, Mark M. Tanaka

Publication date: 31 October 2006

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/s0040-5809(03)00010-8

zbMATH Keywords

transpositionbirth-and-death processmutation ratepathogeninsertion sequencepulsed-field gel electrophoresissubstitution rate

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Applications of branching processes (60J85) Medical epidemiology (92C60)

Related Items (5)

Gain-loss-duplication models for copy number evolution on a phylogeny: exact algorithms for computing the likelihood and its gradient ⋮ Birth/birth-death processes and their computable transition probabilities with biological applications ⋮ Fitting birth-death processes to panel data with applications to bacterial DNA fingerprinting ⋮ Likelihood-based inference for discretely observed birth-death-shift processes, with applications to evolution of mobile genetic elements ⋮ Estimation for General Birth-Death Processes

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• THE BEHAVIOUR OF AN ESTIMATOR FOR A SIMPLE BIRTH AND DEATH PROCESS
• ON ESTIMATING THE PARAMETERS OF A BIRTH‐DEATH PROCESS
• Estimation in the birth process

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