Pattern recognition methods for advanced stochastic protein sequence analysis using HMMs

DOI10.1016/J.PATCOG.2005.10.007zbMath1103.68779OpenAlexW2170437606MaRDI QIDQ850121

Gernot A. Fink, Thomas Plötz

Publication date: 15 November 2006

Published in: Pattern Recognition (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.patcog.2005.10.007

zbMATH Keywords

HMMprobabilistic protein family modelingprotein sequence analysis

Mathematics Subject Classification ID

Pattern recognition, speech recognition (68T10)

Uses Software

• HMMER
• wmtsa
• ESMERALDA
• AAindex

Cites Work

• Biological Sequence Analysis
• Statistical Properties and Uses of the Wavelet Variance Estimator for the Scale Analysis of Time Series
• Robust Remote Homology Detection by Feature Based Profile Hidden Markov Models
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