The mathematical model and optimistic algorithm of two protein structures alignment

DOI10.1007/BF02832063zbMath1149.92327OpenAlexW2019012247MaRDI QIDQ861495

Zikaio Wu, Yuzhen Guo, Jin-Cheng Zhao, En-Min Feng

Publication date: 29 January 2007

Published in: Journal of Applied Mathematics and Computing (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/bf02832063

zbMATH Keywords

integer programmingdouble dynamic programmingimproved complete information set methodProtein structure alignment

Mathematics Subject Classification ID

Applications of mathematical programming (90C90) Mixed integer programming (90C11) Protein sequences, DNA sequences (92D20) Complexity and performance of numerical algorithms (65Y20)

Cites Work

• A measure of discrepancy of multiple sequences
• Matching protein structures with fuzzy alignments

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