Generation of the exact distribution and simulation of matched nucleotide sequences on a phylogenetic tree

DOI10.1007/s10852-005-9017-yzbMath1105.92020OpenAlexW1965617748MaRDI QIDQ864928

Lars S. Jermiin, John Robinson, Faisal Ababneh

Publication date: 13 February 2007

Published in: JMMA. Journal of Mathematical Modelling and Algorithms (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10852-005-9017-y

Mathematics Subject Classification ID

Computational methods in Markov chains (60J22) Problems related to evolution (92D15) Monte Carlo methods (65C05) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Biochemistry, molecular biology (92C40) Numerical analysis or methods applied to Markov chains (65C40) Protein sequences, DNA sequences (92D20)

Related Items (2)

An evolutionary reduction principle for mutation rates at multiple loci ⋮ PITMAN MEDAL

Uses Software

• R
• S-PLUS
• fastDNAml
• PHYLIP
• Seq-Gen
• Hetero

Cites Work

• Unnamed Item

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