Microsatellite evolution: Markov transition functions for a suite of models

DOI10.1016/j.tpb.2006.10.001zbMath1118.92050OpenAlexW2079690221WikidataQ51928270 ScholiaQ51928270MaRDI QIDQ885382

Joseph C. Watkins

Publication date: 13 June 2007

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2006.10.001

zbMATH Keywords

Markov processGenerating functionsMicrosatellites

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20)

Related Items

The distribution of coalescence times and distances between microsatellite alleles with changing effective population size ⋮ On the size distribution of private microsatellite alleles ⋮ A Markov chain description of the stepwise mutation model: local and global behaviour of the allele process ⋮ The SMM model as a boundary value problem using the discrete diffusion equation

Cites Work

• Sampling distribution for microsatellites amplified by PCR: mean field approximation and its applications to genotyping
• Stepwise mutation likelihood computation by sequential importance sampling in subdivided population models
• Inference in Molecular Population Genetics
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