Circular codes, symmetries and transformations

DOI10.1007/S00285-014-0806-7zbMath1369.92032OpenAlexW2108000258WikidataQ46868518 ScholiaQ46868518MaRDI QIDQ888294

Elena Fimmel, Diego Luis Gonzalez, Simone Giannerini, Lutz H. Strüngmann

Publication date: 30 October 2015

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s00285-014-0806-7

zbMATH Keywords

symmetrygroup theorygenetic codecircular codesnucleotide transformations

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Other types of codes (94B60)

Related Items (12)

The non-power model of the genetic code: a paradigm for interpreting genomic information ⋮ Circular tessera codes in the evolution of the genetic code ⋮ Strong comma-free codes in genetic information ⋮ n -Nucleotide circular codes in graph theory ⋮ The relation between \(k\)-circularity and circularity of codes ⋮ Reading frame retrieval of genes: a new parameter of codon usage based on the circular code theory ⋮ The quality of genetic code models in terms of their robustness against point mutations ⋮ Motif lengths of circular codes in coding sequences ⋮ Circular code motifs in genomes of eukaryotes ⋮ The maximal \(C^3\) self-complementary trinucleotide circular code \(X\) in genes of bacteria, eukaryotes, plasmids and viruses ⋮ Dinucleotide circular codes and bijective transformations ⋮ An extended genetic scale of reading frame coding

Cites Work

• A classification of 20-trinucleotide circular codes
• Strong trinucleotide circular codes
• A 2006 review of circular codes in genes
• A relation between trinucleotide comma-free codes and trinucleotide circular codes
• Identification of all trinucleotide circular codes
• Circular codes revisited: a statistical approach
• Identification of circular codes in bacterial genomes and their use in a factorization method for retrieving the reading frames of genes
• On dichotomic classes and bijections of the genetic code
• Comma-Free Codes
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