Evolutionary decision rules for predicting protein contact maps

DOI10.1007/S10044-012-0297-3zbMath1328.92054OpenAlexW2046316646MaRDI QIDQ903121

Alfonso Eduardo Marquez-Chamorro, Jesus Salvador Aguilar-Ruiz, Gualberto Asencio-Cortes, Federico Divina

Publication date: 5 January 2016

Published in: PAA. Pattern Analysis and Applications (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10044-012-0297-3

zbMATH Keywords

protein structure predictioncontact mapmulti-objective evolutionary computationresidue-residue contact

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of mathematical programming (90C90) Multi-objective and goal programming (90C29) Approximation methods and heuristics in mathematical programming (90C59) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Uses Software

• WEKA
• MULTICOM
• PSICOV
• NNcon
• I-TASSER
• PSI-BLAST
• BLAST
• AAindex
• FT-COMAR

Cites Work

• Novel generalized-\(\alpha \) methods for interfield parallel integration of heterogeneous structural dynamic systems
• Recent advances on the discretizable molecular distance geometry problem

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