Distribution of distances between topologies and its effect on detection of phylogenetic recombination

DOI10.1007/s10463-009-0259-8zbMath1422.62323OpenAlexW2005166585MaRDI QIDQ904079

Leonardo de Oliveira Martins, Hirohisa Kishino

Publication date: 15 January 2016

Published in: Annals of the Institute of Statistical Mathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10463-009-0259-8

zbMATH Keywords

Markov chain Monte CarlophylogeneticsSPR distanceviral recombination

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) Applications of branching processes (60J85)

Uses Software

• fastDNAml
• PAML
• BayesDA
• cBrother

Cites Work

• Unnamed Item
• On the combinatorics of rooted binary phylogenetic trees
• Improving the acceptance rate of reversible jump MCMC proposals
• Bayesian curve-fitting with free-knot splines
• Bayesian Variable Selection in Linear Regression
• Inferring Spatial Phylogenetic Variation Along Nucleotide Sequences
• Bayesian Measures of Model Complexity and Fit
• Bayes Factors
• Parameterization and Bayesian Modeling
• Subtree transfer operations and their induced metrics on evolutionary trees
• A new look at the statistical model identification

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