A small trip in the untranquil world of genomes: a survey on the detection and analysis of genome rearrangement breakpoints

DOI10.1016/j.tcs.2008.01.014zbMath1142.92012OpenAlexW2014057920MaRDI QIDQ932313

Marie-France Sagot, Claire Lemaitre

Publication date: 10 July 2008

Published in: Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tcs.2008.01.014

zbMATH Keywords

breakpoint regionconserved segmentgenome dynamicssynteny blockwhole genome alignment

Mathematics Subject Classification ID

Problems related to evolution (92D15) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

Related Items (1)

Textual data compression in computational biology: algorithmic techniques

Uses Software

• LAGAN
• BLAT
• AVID
• BLASTZ
• Mauve

Cites Work

• Reconstructing an ancestral genome using minimum segments duplications and reversals.
• An algorithm for the distance between two finite sequences

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