Subsequence-based feature map for protein function classification

DOI10.1016/J.COMPBIOLCHEM.2007.11.004zbMath1141.92018OpenAlexW2083582778WikidataQ47942156 ScholiaQ47942156MaRDI QIDQ936077

Omer Sinan Sarac, Rengul Cetin-Atalay, Volkan Atalay, Özge Gürsoy-Yüzügüllü

Publication date: 12 August 2008

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: http://hdl.handle.net/11693/23154

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Biochemistry, molecular biology (92C40)

Related Items (1)

Feature extraction by statistical contact potentials and wavelet transform for predicting subcellular localizations in gram negative bacterial proteins

Uses Software

• SVMlight
• GOtcha
• PSI-BLAST
• BLAST
• PRED-CLASS
• LFM-Pro
• MotifCut
• SVM-Prot

Cites Work

• Percolation of annotation errors through hierarchically structured protein sequence databases
• ECS: an automatic enzyme classifier based on functional domain composition

This page was built for publication: Subsequence-based feature map for protein function classification