An algorithm based on 3-braids to solve tangle equations arising in the action of Gin DNA invertase

DOI10.1016/j.amc.2010.01.007zbMath1184.92013OpenAlexW1989598629MaRDI QIDQ961559

David A. Lizárraga-Navarro, Hugo Cabrera-Ibarra

Publication date: 31 March 2010

Published in: Applied Mathematics and Computation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.amc.2010.01.007

zbMATH Keywords

algorithmenzyme3-braidstangle modelpseudo-code

Mathematics Subject Classification ID

Probabilistic models, generic numerical methods in probability and statistics (65C20) Biochemistry, molecular biology (92C40) Software, source code, etc. for problems pertaining to biology (92-04)

Related Items (4)

Computing the Conway polynomial of several closures of oriented 3-braids ⋮ Recent advances on the non-coherent band surgery model for site-specific recombination ⋮ BRAID SOLUTIONS TO THE ACTION OF THE GIN ENZYME ⋮ Tangle equations involving Montesinos links

Uses Software

• TopoICE
• TangleSolve

Cites Work

• A calculus for rational tangles: applications to DNA recombination
• ON THE CLASSIFICATION OF RATIONAL 3-TANGLES
• Tangle analysis of Gin site-specific recombination
• BRAID SOLUTIONS TO THE ACTION OF THE GIN ENZYME
• Knots
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