Continuous optimization methods for structure alignments

DOI10.1007/s10107-006-0091-3zbMath1135.90043OpenAlexW2118941696MaRDI QIDQ995790

José Mario Martínez, Leandro Martínez, Flávio Yano, Roberto Andreani

Publication date: 10 September 2007

Published in: Mathematical Programming. Series A. Series B (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10107-006-0091-3

zbMATH Keywords

order-value optimizationprotein alignment

Mathematics Subject Classification ID

Nonlinear programming (90C30) Methods of quasi-Newton type (90C53)

Related Items (7)

Optimality condition and complexity of order-value optimization problems and low order-value optimization problems ⋮ Generalized order-value optimization ⋮ Robust registration of point sets using iteratively reweighted least squares ⋮ Low order-value approach for solving var-constrained optimization problems ⋮ A robust method based on LOVO functions for solving least squares problems ⋮ On sequential optimality conditions for smooth constrained optimization ⋮ Low order-value optimization and applications

Uses Software

• MAMMOTH
• DaliLite

Cites Work

• Low order-value optimization and applications
• Two applications of the divide \(\&\) conquer principle in the molecular sciences
• Order-value optimization: formulation and solution by means of a primal Cauchy method
• Numerical Optimization
• The String-to-String Correction Problem
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