PeakSegJoint

Joint Peak Detection in Several ChIP-Seq Samples

Last update: 24 January 2024

Copyright license: GNU General Public License, version 3.0

Software version identifier: 2022.4.6, 2023.4.24, 2017.08.11, 2018.01.09, 2018.10.3, 2024.1.24

Description

Jointly segment several ChIP-seq samples to find the peaks which are the same and different across samples. The fast approximate maximum Poisson likelihood algorithm is described in "PeakSegJoint: fast supervised peak detection via joint segmentation of multiple count data samples" <arXiv:1506.01286> by TD Hocking and G Bourque.

Cites work

PeakSegJoint: fast supervised peak detection via joint segmentation of multiple count data samples

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