ClueR

CRANClueRMaRDI QIDQ148343

Cluster Evaluation

Pengyi Yang

Last update: 15 November 2023

Copyright license: GNU General Public License, version 3.0

Software version identifier: 1.4, 1.0, 1.1, 1.2, 1.3, 1.4.2

Description

CLUster Evaluation (CLUE) is a computational method for identifying optimal number of clusters in a given time-course dataset clustered by cmeans or kmeans algorithms and subsequently identify key kinases or pathways from each cluster. Its implementation in R is called ClueR. See README on <https://github.com/PYangLab/ClueR> for more details. P Yang et al. (2015) <doi:10.1371/journal.pcbi.1004403>.

Cites work

• Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series Phosphoproteomics Data

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