EpiNow2

Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters

Sam Abbott, Hamada S. Badr, Joel Hellewell, Joe Hickson, Katelyn M. Gostic, Katharine Sherratt, Michael Dewitt, Sebastian Funk

Last update: 26 September 2023

Copyright license: MIT license, File License

Software version identifier: 1.3.5, 1.1.0, 1.2.1, 1.3.1, 1.3.2, 1.3.4, 1.4.0

Description

Estimates the time-varying reproduction number, rate of spread, and doubling time using a range of open-source tools (Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>), and current best practices (Gostic et al. (2020) <doi:10.1101/2020.06.18.20134858>). It aims to help users avoid some of the limitations of naive implementations in a framework that is informed by community feedback and is actively supported.

Cites work

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