Metatool
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Related Items (22)
On enumerating minimal siphons in Petri nets using CLP and SAT solvers: theoretical and practical complexity ⋮ PoCaB: A Software Infrastructure to Explore Algebraic Methods for Bio-chemical Reaction Networks ⋮ Energy-based analysis of biomolecular pathways ⋮ On flux coupling analysis of metabolic subsystems ⋮ The Minimal Hitting Set Generation Problem: Algorithms and Computation ⋮ Energetically plausible model of a self-maintaining protocellular system ⋮ An interval approach for dealing with flux distributions and elementary modes activity patterns ⋮ Parallelization of nullspace algorithm for the computation of metabolic pathways ⋮ Modular decomposition of metabolic systems via null-space analysis ⋮ Flux modules in metabolic networks ⋮ A statistical thermodynamical interpretation of metabolism ⋮ On dynamically generating relevant elementary flux modes in a metabolic network using optimization ⋮ Restricted cooperative games on metabolic networks reveal functionally important reactions ⋮ Stoichiometric analysis of self-maintaining metabolisms ⋮ Structural robustness of metabolic networks with respect to multiple knockouts ⋮ An old paper revisited: ``A mathematical model of carbohydrate energy metabolism. interaction between glycolysis, the krebs cycle and the H-transporting shuttles at varying atpases load by V. V. Dynnik et al. ⋮ Modeling of the U1 snRNP assembly pathway in alternative splicing in human cells using Petri nets ⋮ A new constraint-based description of the steady-state flux cone of metabolic networks ⋮ Finding MEMo: minimum sets of elementary flux modes ⋮ Stoichiometric and Constraint-Based Analysis of Biochemical Reaction Networks ⋮ Generic flux coupling analysis ⋮ Robustness analysis of elementary flux modes generated by column generation
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