FME

A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis

Last update: 5 July 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 1.3.6.2, 1.0, 1.1.1, 1.1, 1.3.1, 1.3.2, 1.3.5, 1.3.6.1, 1.3, 1.3.6.3

Source code repository: https://github.com/cran/FME

Description

Provides functions to help in fitting models to data, to perform Monte Carlo, sensitivity and identifiability analysis. It is intended to work with models be written as a set of differential equations that are solved either by an integration routine from package 'deSolve', or a steady-state solver from package 'rootSolve'. However, the methods can also be used with other types of functions.

Related Items (25)

Automatically tuned general-purpose MCMC via new adaptive diagnostics ⋮ Laplace based approximate posterior inference for differential equation models ⋮ Mathematical modeling of tumor and cancer stem cells treated with CAR-T therapy and inhibition of TGF-\(\beta\) ⋮ Modeling nutrient and disease dynamics in a plant-pathogen system ⋮ Inference for differential equation models using relaxation via dynamical systems ⋮ Bayesian Calibration of the Community Land Model Using Surrogates ⋮ A modified Leslie-Gower predator-prey interaction model and parameter identifiability ⋮ Dynamics of HIV-1 coinfection in different susceptible target cell populations during cell-free infection ⋮ A theoretical mathematical assessment of the effectiveness of coartemether in the treatment of \textit{Plasmodium falciparum} malaria infection ⋮ Modeling and Predicting the Influence of PM2.5 on Children’s Respiratory Diseases ⋮ Multiple Verification in Complex Biological Systems: The Bone Remodelling Case Study ⋮ GREENeR ⋮ biogrowth ⋮ growthrates ⋮ BCE ⋮ spsh ⋮ ConsReg ⋮ DivE ⋮ capm ⋮ bioinactivation ⋮ bioOED ⋮ Mathematical model of radiation effects on thrombopoiesis in rhesus macaques and humans ⋮ Bayesian mechanistic modeling of thermodynamically controlled volatile fatty acid, hydrogen and methane production in the bovine rumen ⋮ Unnamed Item ⋮ Pairing food and drink: a physiological model of blood ethanol levels for a variety of drinking behaviors

This page was built for software: FME