GSA

swMATH18747CRANGSAMaRDI QIDQ30578

Gene Set Analysis

Brad Efron

Last update: 19 March 2022

Copyright license: GNU Library General Public License, version 2.0, GNU Lesser General Public License, version 2.1, GNU Lesser General Public License, version 3.0

Software version identifier: 1.03.2

Source code repository: https://github.com/cran/GSA

Related Items (35)

Incorporation of gene exchangeabilities improves the reproducibility of gene set rankings ⋮ A high-dimensional two-sample test for the mean using random subspaces ⋮ Stable feature selection for biomarker discovery ⋮ Bayesian nonparametric clustering and association studies for candidate SNP observations ⋮ Identification of consistent functional genetic modules ⋮ A two-sample test for high-dimensional data with applications to gene-set testing ⋮ Test for high dimensional regression coefficients of partially linear models ⋮ Rank-based score tests for high-dimensional regression coefficients ⋮ Distance-correlation based gene set analysis in longitudinal studies ⋮ Additive varying-coefficient model for nonlinear gene-environment interactions ⋮ A new nonparametric test for high-dimensional regression coefficients ⋮ Penalized model-based clustering ⋮ Microarrays, empirical Bayes and the two-groups model ⋮ Shrinkage-based diagonal Hotelling's tests for high-dimensional small sample size data ⋮ Permutation test for incomplete paired data with application to cDNA microarray data ⋮ A Bayesian model averaging approach for observational gene expression studies ⋮ Graph Centrality Based Prediction of Cancer Genes ⋮ Deriving and comparing the distribution for the number of false positives in single step methods to control \(k\)-FWER ⋮ Hunting for significance: Bayesian classifiers under a mixture loss function ⋮ Conditional mean and quantile dependence testing in high dimension ⋮ Robust \(U\)-type test for high dimensional regression coefficients using refitted cross-validation variance estimation ⋮ Identification of differentially expressed spatial clusters using humoral response microarray data ⋮ Partition clustering of high dimensional low sample size data based on \(p\)-values ⋮ Joint adaptive mean-variance regularization and variance stabilization of high dimensional data ⋮ Probabilistic methods in cancer biology ⋮ Simultaneous inference: when should hypothesis testing problems be combined? ⋮ A statistical framework for testing functional categories in microarray data ⋮ Distribution-free tests of mean vectors and covariance matrices for multivariate paired data ⋮ TcGSA ⋮ On testing the significance of sets of genes ⋮ samr ⋮ A feasible high dimensional randomization test for the mean vector ⋮ Combined Hypothesis Testing on Graphs With Applications to Gene Set Enrichment Analysis ⋮ Consistency of invariance-based randomization tests ⋮ A new test for part of high dimensional regression coefficients

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