glmmTMB

Generalized Linear Mixed Models using Template Model Builder

Koen van Bentham, Arni Magnusson, Ben Bolker, Casper Berg, Mollie Brooks, Anders Nielsen, Kasper Kristensen, Hans Skaug, Martin Maechler

Last update: 7 October 2023

Copyright license: GNU Affero General Public License, version 3.0

Software version identifier: 1.1.6, 1.1.7, 0.1.1, 0.1.4, 0.2.0, 0.2.1.0, 0.2.2.0, 0.2.3, 1.0.0, 1.0.1, 1.0.2.1, 1.1.1, 1.1.2.2, 1.1.2.3, 1.1.2, 1.1.3, 1.1.4, 1.1.5, 1.1.8

Source code repository: https://github.com/cran/glmmTMB

Description

Fit linear and generalized linear mixed models with various extensions, including zero-inflation. The models are fitted using maximum likelihood estimation via 'TMB' (Template Model Builder). Random effects are assumed to be Gaussian on the scale of the linear predictor and are integrated out using the Laplace approximation. Gradients are calculated using automatic differentiation.

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