MiscMetabar

Miscellaneous Functions for Metabarcoding Analysis

Last update: 17 February 2024

Copyright license: GNU Affero General Public License, version 3.0

Software version identifier: 0.7.9

Description

Facilitate the description, transformation, exploration, and reproducibility of metabarcoding analyses. 'MiscMetabar' is mainly built on top of the 'phyloseq', 'dada2' and 'targets' R packages. It helps to build reproducible and robust bioinformatics pipelines in R. 'MiscMetabar' makes ecological analysis of alpha and beta-diversity easier, more reproducible and more powerful by integrating a large number of tools. Important features are described in Taudière A. (2023) <doi:10.21105/joss.06038>.

Cites work

MiscMetabar: an R package to facilitate visualization and reproducibility in metabarcoding analysis

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