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taxonomizr

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Software:78689



CRANtaxonomizrMaRDI QIDQ78689

Functions to Work with NCBI Accessions and Taxonomy

Scott Sherrill-Mix

Last update: 15 December 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0, File License

Software version identifier: 0.10.2, 0.2.2, 0.5.1, 0.5.3, 0.6.0, 0.7.1, 0.8.0, 0.9.2, 0.9.3, 0.10.6

Functions for assigning taxonomy to NCBI accession numbers and taxon IDs based on NCBI's accession2taxid and taxdump files. This package allows the user to download NCBI data dumps and create a local database for fast and local taxonomic assignment.





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