Identify Gram-negative bacterial secreted protein types by incorporating different modes of PSSM into Chou's general PseAAC via Kullback-Leibler divergence
type: Item
instance of: scholarly article
title: Identify Gram-negative bacterial secreted protein types by incorporating different modes of PSSM into Chou's general PseAAC via Kullback-Leibler divergence
zbMATH Open document ID: 1406.92196
author: Yunyun Liang
author: Shengli Zhang
published in: Journal of Theoretical Biology
publication date: 2019-01-31T00:00:00Z
Mathematics Subject Classification ID: 92C40
Mathematics Subject Classification ID: 92D20
Mathematics Subject Classification ID: 68T05
zbMATH DE Number: 7008793
zbMATH Keywords: secreted proteins
zbMATH Keywords: position-specific scoring matrix
zbMATH Keywords: correlation analysis
zbMATH Keywords: nonnegative matrix factorization
zbMATH Keywords: support vector machine
describes a project that uses: iPTM-mLys
describes a project that uses: Prnam-PC
describes a project that uses: PSI-BLAST
describes a project that uses: iEnhancer-2L
describes a project that uses: iPPI-Esml
describes a project that uses: iPhos-PseEvo
describes a project that uses: pLoc-mAnimal
describes a project that uses: pLoc-mVirus
describes a project that uses: iRNA-AI
describes a project that uses: POSSUM
describes a project that uses: iATC-mHyb
describes a project that uses: iRNAm5C-PseDNC
describes a project that uses: iPreny-PseAAC
describes a project that uses: iPromoter-2L
describes a project that uses: iKcr-PseEns
describes a project that uses: Gneg-mPLoc
describes a project that uses: iProt-Sub
describes a project that uses: pLoc-mHum
describes a project that uses: iCar-PseCp
describes a project that uses: UniProt
describes a project that uses: Pse-in-One
describes a project that uses: iSNO-AAPair
describes a project that uses: BLAST
describes a project that uses: pLoc-mEuk
describes a project that uses: iRNA-PseColl
describes a project that uses: iRSpot-EL
describes a project that uses: pLoc-mGneg
describes a project that uses: pLoc-mPlant
describes a project that uses: AAindex
describes a project that uses: 2L-piRNA
describes a project that uses: LIBSVM
describes a project that uses: iRSpot-PseDNC
describes a project that uses: PseKNC
MaRDI profile type: Publication
Wikidata QID: Q56976900
full work available at URL: j.jtbi.2018.05.035
OpenAlex ID: W2807342250
cites work: Predicting protein structural class based on multi-features fusion
cites work: Some remarks on protein attribute prediction and pseudo amino acid composition
cites work: Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou's general PseAAC
cites work: Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou's pseudo amino acid composition
cites work: Learning the parts of objects by non-negative matrix factorization
cites work: Gneg-mPLoc: a top-down strategy to enhance the quality of predicting subcellular localization of Gram-negative bacterial proteins
cites work: Q4261789
cites work: Prediction of protein subcellular localization with oversampling approach and Chou's general PseAAC
DOI: 10.1016/J.JTBI.2018.05.035
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description: scientific article; zbMATH DE number 7008793