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The metabolic domestication syndrome of budding yeast - MaRDI portal

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The metabolic domestication syndrome of budding yeast

From MaRDI portal



DOI10.5281/zenodo.10680639Zenodo10680639MaRDI QIDQ6693714

Dataset published at Zenodo repository.

Author name not available (Why is that?)

Publication date: 19 February 2024

Copyright license: No records found.



Description

For a detailed description about the metabolomic measurements, see the following publication: https://doi.org/10.1073/pnas.2313354121 -ALL_AA.zip file: raw LC-MS files of amino acid measurements -All_FIA.zip file: raw LC-MS files containing untargeted metabolome data -All_TCA_cycle.zip file: raw LC-MS files of TCA cycle intemediate measurements The following files contain data in MetaboLights like format: -a_MTBLS9200_FIA-MS_negative__metabolite_profiling-1.txt pairing between sample names and filenames in untargeted metabolome profiling -a_MTBLS9200_LC-MS_alternating_hilic_metabolite_profiling.txt pairing between sample names and filenames in Amino acid level determination -a_MTBLS9200_LC-MS_negative_reverse-phase_metabolite_profiling.txt pairing between sample names and filenames in TCA cycle intemedier determination -s_MTBLS9200.txt contains sample name, cultivation batch, replicate number, genotype pairing for all the deposited data - m_MTBLS9200_FIA-MS_negative__metabolite_profiling-1_v2_maf.tsv: metabolite IDs and metabolite intensity data of untargeted metabolome measurements - m_MTBLS9200_LC-MS_alternating_hilic_metabolite_profiling_v2_maf.tsv: metabolite IDs and metabolite intensity data of amino acid measurements - m_MTBLS9200_LC-MS_negative_reverse-phase_metabolite_profiling_v2_maf.tsv: metabolite IDs and metabolite intensity data of TCA cycle intemedier measurements The following files contain the same data in a more human-readable format: - Amino_acid_determination.csv: pairing between sample names, filenames, and strain IDs for the amino acid measurements - FIA_untargeted_profiling.csv: pairing between sample names, filenames, and strain IDs for the untargeted metabolome measurements - Tengolics_PNAS_TCA.tsv: pairing between sample names, filenames, strain IDs, and species name for the TCA intermedier measurements






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